Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TIFAQ96CG3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17■□□□□ 0.31
TIFAQ96CG3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TIFAQ96CG3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIFAQ96CG3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17■□□□□ 0.31
TIFAQ96CG3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TIFAQ96CG3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TIFAQ96CG3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIFAQ96CG3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TIFAQ96CG3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17■□□□□ 0.31
TIFAQ96CG3 PCDHB17P-201ENST00000539533 2393 ntBASIC17■□□□□ 0.31
TIFAQ96CG3 AL031731.1-201ENST00000642131 2094 ntBASIC17■□□□□ 0.31
TIFAQ96CG3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17■□□□□ 0.31
TIFAQ96CG3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TIFAQ96CG3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 AC091812.3-201ENST00000621362 345 ntBASIC16.99■□□□□ 0.31
TIFAQ96CG3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 AC092053.1-201ENST00000605787 1936 ntBASIC16.99■□□□□ 0.31
TIFAQ96CG3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 AC015818.8-201ENST00000587907 1519 ntBASIC16.99■□□□□ 0.31
TIFAQ96CG3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIFAQ96CG3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
TIFAQ96CG3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 AC092978.1-202ENST00000637590 1327 ntBASIC16.98■□□□□ 0.31
TIFAQ96CG3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.98■□□□□ 0.31
TIFAQ96CG3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 AC245884.6-201ENST00000515672 1067 ntBASIC16.98■□□□□ 0.31
TIFAQ96CG3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.98■□□□□ 0.31
TIFAQ96CG3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIFAQ96CG3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TIFAQ96CG3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIFAQ96CG3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms