Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 OR2I1P-209ENST00000641730 5365 ntBASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AC005622.1-201ENST00000636801 1703 ntBASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 IGLL3P-201ENST00000412472 434 ntBASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AL590627.1-203ENST00000421194 1026 ntBASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 HCG4B-203ENST00000450128 991 ntBASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AL513480.1-201ENST00000451731 511 ntBASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 RPL13AP23-201ENST00000480739 586 ntBASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AC020658.6-201ENST00000623564 1870 ntBASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AC006486.2-201ENST00000624246 2199 ntBASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 AC034105.1-201ENST00000563488 319 ntBASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 MIR4515-201ENST00000584082 81 ntBASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 BX640515.1-201ENST00000617215 977 ntBASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 TMBIM7P-203ENST00000641617 1718 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms