Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AC132008.2-207ENST00000454517 770 ntBASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AC104819.1-201ENST00000504587 486 ntBASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AL365330.1-201ENST00000607459 531 ntBASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AC021097.1-201ENST00000607902 574 ntBASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AC012569.1-201ENST00000591191 1524 ntBASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 AC005332.1-201ENST00000577698 1310 ntBASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 NUS1P2-201ENST00000417358 873 ntBASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 AC134407.2-201ENST00000625089 1978 ntBASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.96■□□□□ 0.15
CKAP2Q8WWK9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 AC006504.4-201ENST00000592118 1568 ntBASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CKAP2Q8WWK9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 AC148477.4-201ENST00000613430 1793 ntBASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKAP2Q8WWK9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms