Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 SPDYE19P-201ENST00000338590 713 ntBASIC14.35□□□□□ -0.11
RNF138Q8WVD3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 GNAQP1-201ENST00000444815 1067 ntBASIC14.35□□□□□ -0.11
RNF138Q8WVD3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AC092364.2-202ENST00000597012 1073 ntBASIC14.35□□□□□ -0.11
RNF138Q8WVD3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AL121723.1-201ENST00000445194 1519 ntBASIC14.35□□□□□ -0.11
RNF138Q8WVD3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF138Q8WVD3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 AL391825.1-201ENST00000457671 1364 ntBASIC14.34□□□□□ -0.11
RNF138Q8WVD3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 AC055876.2-201ENST00000531834 546 ntBASIC14.34□□□□□ -0.11
RNF138Q8WVD3 API5-211ENST00000534695 560 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 MIR3197-201ENST00000582241 73 ntBASIC14.34□□□□□ -0.11
RNF138Q8WVD3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF138Q8WVD3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.33□□□□□ -0.11
RNF138Q8WVD3 AC020658.6-201ENST00000623564 1870 ntBASIC14.33□□□□□ -0.11
RNF138Q8WVD3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF138Q8WVD3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF138Q8WVD3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF138Q8WVD3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RNF138Q8WVD3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF138Q8WVD3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF138Q8WVD3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF138Q8WVD3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF138Q8WVD3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF138Q8WVD3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF138Q8WVD3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF138Q8WVD3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF138Q8WVD3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RNF138Q8WVD3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms