Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 ARSEP1-201ENST00000420443 635 ntBASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AC007274.1-201ENST00000439805 662 ntBASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AC132938.2-201ENST00000579188 680 ntBASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AL591163.1-201ENST00000641757 987 ntBASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AL513477.1-201ENST00000602865 2407 ntBASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AC024909.3-201ENST00000611513 2257 ntBASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 AL512384.1-201ENST00000406683 331 ntBASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 AC025048.3-201ENST00000590609 569 ntBASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 AL359881.2-201ENST00000602973 570 ntBASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 AC005702.4-201ENST00000618393 416 ntBASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 AC068418.2-201ENST00000577309 3703 ntBASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHKBP1Q8TBC3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 MEP1AP4-201ENST00000423244 1087 ntBASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 AC092337.1-201ENST00000568699 1129 ntBASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 AC099568.2-201ENST00000609194 695 ntBASIC16.8■□□□□ 0.28
SHKBP1Q8TBC3 AC074044.1-201ENST00000609673 707 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms