Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 PIN1P1-201ENST00000412108 996 ntBASIC17.2■□□□□ 0.34
BEST2Q8NFU1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 PHKG1P2-201ENST00000457537 863 ntBASIC17.2■□□□□ 0.34
BEST2Q8NFU1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 AC104794.3-201ENST00000566840 1248 ntBASIC17.2■□□□□ 0.34
BEST2Q8NFU1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 AL450472.2-201ENST00000603663 1156 ntBASIC17.2■□□□□ 0.34
BEST2Q8NFU1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST2Q8NFU1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AC004461.2-201ENST00000629517 803 ntBASIC17.19■□□□□ 0.34
BEST2Q8NFU1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST2Q8NFU1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AC011477.6-201ENST00000604980 1927 ntBASIC17.18■□□□□ 0.34
BEST2Q8NFU1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms