Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 PRSS29P-201ENST00000440800 595 ntBASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 FAM185BP-201ENST00000443595 716 ntBASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 MIR4515-201ENST00000584082 81 ntBASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 HNRNPDP1-201ENST00000439535 754 ntBASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 EMBP1-201ENST00000458200 901 ntBASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 AC108073.2-201ENST00000464002 357 ntBASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 MIR3909-201ENST00000579518 119 ntBASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 AC021097.1-201ENST00000607902 574 ntBASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 AP002414.3-201ENST00000589352 1468 ntBASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.18□□□□□ -0.14
DNAAF1Q8NEP3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms