Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.89■□□□□ 0.78
CARMIL3Q8ND23 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 AC079316.1-201ENST00000548397 411 ntBASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 AC103810.3-201ENST00000583567 96 ntBASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARMIL3Q8ND23 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 GPAA1P2-201ENST00000417923 928 ntBASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 AP001063.1-201ENST00000568332 529 ntBASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CARMIL3Q8ND23 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AC124067.4-201ENST00000519691 2379 ntBASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AC136604.1-201ENST00000418535 575 ntBASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AC016694.1-201ENST00000434179 700 ntBASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 PFN1P12-201ENST00000455938 534 ntBASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 HNRNPUP1-201ENST00000554987 333 ntBASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AC010328.2-201ENST00000597698 1111 ntBASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 AC134312.5-201ENST00000568031 1313 ntBASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms