Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF546Q86UE3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
ZNF546Q86UE3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
ZNF546Q86UE3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
ZNF546Q86UE3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.39□□□□□ -0.27
ZNF546Q86UE3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 VENTXP5-201ENST00000523979 775 ntBASIC13.39□□□□□ -0.27
ZNF546Q86UE3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AC010203.1-204ENST00000548782 407 ntBASIC13.39□□□□□ -0.27
ZNF546Q86UE3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AL138831.2-201ENST00000606564 490 ntBASIC13.39□□□□□ -0.27
ZNF546Q86UE3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AC008677.1-201ENST00000519230 1561 ntBASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AC148477.4-201ENST00000613430 1793 ntBASIC13.39□□□□□ -0.27
ZNF546Q86UE3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms