Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 CDC14C-201ENST00000428251 1719 ntBASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 AC069224.1-201ENST00000566372 1715 ntBASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 AL691432.1-201ENST00000596308 1422 ntBASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 KLF2P3-201ENST00000451977 1087 ntBASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 LINC02447-202ENST00000501888 2146 ntBASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 AC051619.7-201ENST00000568314 623 ntBASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 RN7SL828P-201ENST00000607615 303 ntBASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD3Q7Z3D4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 LINC02084-201ENST00000606069 1096 ntBASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 AL133215.2-201ENST00000609242 977 ntBASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 CYP4F24P-201ENST00000586049 1580 ntBASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 AL035456.1-201ENST00000456064 1369 ntBASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.13■□□□□ 0.17
LYSMD3Q7Z3D4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 AP001282.1-201ENST00000531301 1499 ntBASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 AC120057.1-201ENST00000483947 663 ntBASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms