Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.22■□□□□ 0.83
PTF1AQ7RTS3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AC148477.4-201ENST00000613430 1793 ntBASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AL133373.2-201ENST00000623187 2828 ntBASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 NUP210P1-202ENST00000504322 710 ntBASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 MIR4750-201ENST00000584564 56 ntBASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AL645939.5-201ENST00000606834 243 ntBASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 AC078925.2-201ENST00000624013 1973 ntBASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTF1AQ7RTS3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
PTF1AQ7RTS3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PTF1AQ7RTS3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 RPL13AP19-201ENST00000434320 584 ntBASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 AC104784.1-201ENST00000473096 294 ntBASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTF1AQ7RTS3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 AC114501.1-201ENST00000445949 172 ntBASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 AC022217.1-201ENST00000521069 738 ntBASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTF1AQ7RTS3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTF1AQ7RTS3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTF1AQ7RTS3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.18■□□□□ 0.82
PTF1AQ7RTS3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTF1AQ7RTS3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTF1AQ7RTS3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.18■□□□□ 0.82
PTF1AQ7RTS3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTF1AQ7RTS3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms