Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.38■□□□□ 0.05
RNF44Q7L0R7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 AL590560.3-201ENST00000623350 461 ntBASIC15.38■□□□□ 0.05
RNF44Q7L0R7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF44Q7L0R7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 TSSK5P-201ENST00000423978 907 ntBASIC15.37■□□□□ 0.05
RNF44Q7L0R7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms