Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
USP50Q70EL3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
USP50Q70EL3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
USP50Q70EL3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.58■□□□□ 0.57
USP50Q70EL3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP50Q70EL3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP50Q70EL3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
USP50Q70EL3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP50Q70EL3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.58■□□□□ 0.57
USP50Q70EL3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.58■□□□□ 0.57
USP50Q70EL3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
USP50Q70EL3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
USP50Q70EL3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
USP50Q70EL3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
USP50Q70EL3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 KLF2P2-201ENST00000416807 1039 ntBASIC18.58■□□□□ 0.56
USP50Q70EL3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.58■□□□□ 0.56
USP50Q70EL3 EEF1DP6-201ENST00000449232 372 ntBASIC18.58■□□□□ 0.56
USP50Q70EL3 RN7SL11P-201ENST00000471305 293 ntBASIC18.58■□□□□ 0.56
USP50Q70EL3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.58■□□□□ 0.56
USP50Q70EL3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.58■□□□□ 0.56
USP50Q70EL3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.58■□□□□ 0.56
USP50Q70EL3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.58■□□□□ 0.56
USP50Q70EL3 PRKXP1-201ENST00000561423 1122 ntBASIC18.58■□□□□ 0.56
USP50Q70EL3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.58■□□□□ 0.56
USP50Q70EL3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.58■□□□□ 0.56
USP50Q70EL3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.58■□□□□ 0.56
USP50Q70EL3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
USP50Q70EL3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 HLA-A-202ENST00000376806 1854 ntBASIC18.58■□□□□ 0.56
USP50Q70EL3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.58■□□□□ 0.56
USP50Q70EL3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.58■□□□□ 0.56
USP50Q70EL3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP50Q70EL3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.58■□□□□ 0.56
USP50Q70EL3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.57■□□□□ 0.56
USP50Q70EL3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.57■□□□□ 0.56
USP50Q70EL3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP50Q70EL3 HTR7P1-202ENST00000624664 4411 ntBASIC18.57■□□□□ 0.56
USP50Q70EL3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.57■□□□□ 0.56
USP50Q70EL3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP50Q70EL3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.57■□□□□ 0.56
USP50Q70EL3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP50Q70EL3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.57■□□□□ 0.56
USP50Q70EL3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.57■□□□□ 0.56
USP50Q70EL3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.57■□□□□ 0.56
USP50Q70EL3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.57■□□□□ 0.56
USP50Q70EL3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
USP50Q70EL3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.57■□□□□ 0.56
USP50Q70EL3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP50Q70EL3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
USP50Q70EL3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.57■□□□□ 0.56
USP50Q70EL3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.57■□□□□ 0.56
USP50Q70EL3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.57■□□□□ 0.56
USP50Q70EL3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP50Q70EL3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP50Q70EL3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP50Q70EL3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
USP50Q70EL3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP50Q70EL3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.57■□□□□ 0.56
USP50Q70EL3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.57■□□□□ 0.56
USP50Q70EL3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP50Q70EL3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
USP50Q70EL3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
USP50Q70EL3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.56■□□□□ 0.56
USP50Q70EL3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.56■□□□□ 0.56
USP50Q70EL3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP50Q70EL3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP50Q70EL3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
USP50Q70EL3 AC091544.8-201ENST00000619490 361 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms