Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 IGLL3P-201ENST00000412472 434 ntBASIC16.2■□□□□ 0.18
RAPH1Q70E73 AC009947.1-201ENST00000444350 727 ntBASIC16.2■□□□□ 0.18
RAPH1Q70E73 FAAHP1-202ENST00000446499 1238 ntBASIC16.2■□□□□ 0.18
RAPH1Q70E73 KRT18P34-201ENST00000488218 1270 ntBASIC16.2■□□□□ 0.18
RAPH1Q70E73 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 AP002469.2-201ENST00000531724 424 ntBASIC16.2■□□□□ 0.18
RAPH1Q70E73 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 MYO15B-237ENST00000642007 4893 ntBASIC16.19■□□□□ 0.18
RAPH1Q70E73 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAPH1Q70E73 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAPH1Q70E73 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 HAUS4P1-201ENST00000406739 1145 ntBASIC16.18■□□□□ 0.18
RAPH1Q70E73 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 AC093724.1-201ENST00000448659 1027 ntBASIC16.18■□□□□ 0.18
RAPH1Q70E73 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 AC096734.2-201ENST00000562054 433 ntBASIC16.18■□□□□ 0.18
RAPH1Q70E73 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 AL009183.1-201ENST00000603760 355 ntBASIC16.18■□□□□ 0.18
RAPH1Q70E73 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.18■□□□□ 0.18
RAPH1Q70E73 AC010507.1-201ENST00000633895 436 ntBASIC16.18■□□□□ 0.18
RAPH1Q70E73 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAPH1Q70E73 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms