Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDZRN4Q6ZMN7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.57■□□□□ 0.56
PDZRN4Q6ZMN7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDZRN4Q6ZMN7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.57■□□□□ 0.56
PDZRN4Q6ZMN7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDZRN4Q6ZMN7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDZRN4Q6ZMN7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDZRN4Q6ZMN7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 AC023274.1-201ENST00000418278 595 ntBASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 VN2R19P-201ENST00000442399 1052 ntBASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 AC007191.1-201ENST00000623179 2995 ntBASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDZRN4Q6ZMN7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 OR2I1P-210ENST00000642037 4691 ntBASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 AP002414.1-201ENST00000391405 1147 ntBASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 KRT18P2-201ENST00000447938 1258 ntBASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 EGFEM1P-202ENST00000431685 1563 ntBASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDZRN4Q6ZMN7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 PTCHD3P3-201ENST00000403073 906 ntBASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 HCG4B-203ENST00000450128 991 ntBASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.54■□□□□ 0.56
PDZRN4Q6ZMN7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms