Protein–RNA interactions for Protein: Q5VZ89

DENND4C, DENN domain-containing protein 4C, humanhuman

Predictions only

Length 1,909 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4CQ5VZ89 REXO1L6P-201ENST00000603433 1515 ntBASIC16.18■□□□□ 0.18
DENND4CQ5VZ89 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4CQ5VZ89 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 MIR1247-201ENST00000408206 136 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 KRT43P-201ENST00000434019 910 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 RNA5SP412-201ENST00000516234 123 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AP001063.1-201ENST00000568332 529 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 MIR4538-201ENST00000581377 78 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 TUBB1P2-201ENST00000422712 1306 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 TUBB1P1-201ENST00000503144 1300 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 KLF2P4-201ENST00000451959 1225 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AC108725.1-201ENST00000495472 409 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AC092658.1-201ENST00000505836 891 ntBASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.17■□□□□ 0.18
DENND4CQ5VZ89 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DENND4CQ5VZ89 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4CQ5VZ89 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4CQ5VZ89 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4CQ5VZ89 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.15■□□□□ 0.18
DENND4CQ5VZ89 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DENND4CQ5VZ89 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.15■□□□□ 0.18
DENND4CQ5VZ89 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.15■□□□□ 0.18
DENND4CQ5VZ89 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.15■□□□□ 0.18
DENND4CQ5VZ89 AP001889.1-201ENST00000525414 633 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms