Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AC074044.1-201ENST00000609673 707 ntBASIC20.76■□□□□ 0.91
CCDC27Q2M243 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC27Q2M243 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC27Q2M243 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 BTBD7P1-201ENST00000447253 1453 ntBASIC20.75■□□□□ 0.91
CCDC27Q2M243 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.75■□□□□ 0.91
CCDC27Q2M243 MRPS18AP1-201ENST00000414458 589 ntBASIC20.75■□□□□ 0.91
CCDC27Q2M243 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 AC114501.2-201ENST00000439631 535 ntBASIC20.75■□□□□ 0.91
CCDC27Q2M243 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.75■□□□□ 0.91
CCDC27Q2M243 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 AL390754.1-201ENST00000619088 582 ntBASIC20.75■□□□□ 0.91
CCDC27Q2M243 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.75■□□□□ 0.91
CCDC27Q2M243 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC27Q2M243 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC27Q2M243 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 AC105917.1-201ENST00000506637 2539 ntBASIC20.74■□□□□ 0.91
CCDC27Q2M243 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 AC105250.1-201ENST00000509378 2057 ntBASIC20.74■□□□□ 0.91
CCDC27Q2M243 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC27Q2M243 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC27Q2M243 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC27Q2M243 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC27Q2M243 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms