Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 AC069224.1-201ENST00000566372 1715 ntBASIC10.67□□□□□ -0.7
SYCNQ0VAF6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCNQ0VAF6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 SUPT20HL2-201ENST00000486479 2409 ntBASIC10.66□□□□□ -0.7
SYCNQ0VAF6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AC026396.1-201ENST00000419388 421 ntBASIC10.66□□□□□ -0.7
SYCNQ0VAF6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 SLC25A1P1-201ENST00000528351 927 ntBASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AP002472.1-201ENST00000577490 586 ntBASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 AL513190.1-201ENST00000621254 727 ntBASIC10.66□□□□□ -0.7
SYCNQ0VAF6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.66□□□□□ -0.7
SYCNQ0VAF6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SYCNQ0VAF6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
SYCNQ0VAF6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms