Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC148477.9-201ENST00000623974 539 ntBASIC21.02■□□□□ 0.96
COL16A1Q07092 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL16A1Q07092 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC21.02■□□□□ 0.96
COL16A1Q07092 TBC1D3J-201ENST00000620719 1426 ntBASIC21.02■□□□□ 0.96
COL16A1Q07092 LRRC59-203ENST00000576448 1531 ntBASIC21.02■□□□□ 0.96
COL16A1Q07092 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL16A1Q07092 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
COL16A1Q07092 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
COL16A1Q07092 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
COL16A1Q07092 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL16A1Q07092 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.01■□□□□ 0.95
COL16A1Q07092 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL16A1Q07092 PIN4P1-201ENST00000451079 396 ntBASIC21.01■□□□□ 0.95
COL16A1Q07092 AC021723.1-201ENST00000486306 515 ntBASIC21.01■□□□□ 0.95
COL16A1Q07092 AL157792.1-201ENST00000488281 530 ntBASIC21.01■□□□□ 0.95
COL16A1Q07092 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC21.01■□□□□ 0.95
COL16A1Q07092 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC21.01■□□□□ 0.95
COL16A1Q07092 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
COL16A1Q07092 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC21.01■□□□□ 0.95
COL16A1Q07092 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COL16A1Q07092 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.01■□□□□ 0.95
COL16A1Q07092 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL16A1Q07092 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL16A1Q07092 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL16A1Q07092 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL16A1Q07092 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL16A1Q07092 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.01■□□□□ 0.95
COL16A1Q07092 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL16A1Q07092 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.01■□□□□ 0.95
COL16A1Q07092 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21■□□□□ 0.95
COL16A1Q07092 KRT8P14-201ENST00000414254 1442 ntBASIC21■□□□□ 0.95
COL16A1Q07092 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC21■□□□□ 0.95
COL16A1Q07092 AC074138.1-201ENST00000611182 1303 ntBASIC21■□□□□ 0.95
COL16A1Q07092 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL16A1Q07092 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC21■□□□□ 0.95
COL16A1Q07092 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC21■□□□□ 0.95
COL16A1Q07092 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21■□□□□ 0.95
COL16A1Q07092 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
COL16A1Q07092 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC21■□□□□ 0.95
COL16A1Q07092 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC21■□□□□ 0.95
COL16A1Q07092 AC004923.1-202ENST00000642106 209 ntBASIC21■□□□□ 0.95
COL16A1Q07092 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
COL16A1Q07092 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC21■□□□□ 0.95
COL16A1Q07092 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21■□□□□ 0.95
COL16A1Q07092 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL16A1Q07092 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COL16A1Q07092 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC21■□□□□ 0.95
COL16A1Q07092 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 PP12613-201ENST00000424958 2230 ntBASIC20.99■□□□□ 0.95
COL16A1Q07092 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL16A1Q07092 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.99■□□□□ 0.95
COL16A1Q07092 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 AL139094.1-201ENST00000405549 1188 ntBASIC20.99■□□□□ 0.95
COL16A1Q07092 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.99■□□□□ 0.95
COL16A1Q07092 RPS9P1-201ENST00000419943 583 ntBASIC20.99■□□□□ 0.95
COL16A1Q07092 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 RCC2P8-201ENST00000502779 1035 ntBASIC20.99■□□□□ 0.95
COL16A1Q07092 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC20.99■□□□□ 0.95
COL16A1Q07092 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC20.99■□□□□ 0.95
COL16A1Q07092 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
COL16A1Q07092 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL16A1Q07092 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.98■□□□□ 0.95
COL16A1Q07092 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.98■□□□□ 0.95
COL16A1Q07092 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.98■□□□□ 0.95
COL16A1Q07092 AC090857.1-201ENST00000527400 390 ntBASIC20.98■□□□□ 0.95
COL16A1Q07092 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.98■□□□□ 0.95
COL16A1Q07092 STUB1-204ENST00000564370 875 ntTSL 2 BASIC20.98■□□□□ 0.95
COL16A1Q07092 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.98■□□□□ 0.95
COL16A1Q07092 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL16A1Q07092 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms