Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 AC022532.1-201ENST00000624563 1728 ntBASIC15.48■□□□□ 0.07
HMGCS1Q01581 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 TFAMP1-201ENST00000412727 736 ntBASIC15.48■□□□□ 0.07
HMGCS1Q01581 FAM58CP-201ENST00000435741 640 ntBASIC15.48■□□□□ 0.07
HMGCS1Q01581 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 AC098859.1-201ENST00000502915 1238 ntBASIC15.48■□□□□ 0.07
HMGCS1Q01581 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 AC105233.2-201ENST00000523697 349 ntBASIC15.48■□□□□ 0.07
HMGCS1Q01581 AF228730.5-201ENST00000530288 346 ntBASIC15.48■□□□□ 0.07
HMGCS1Q01581 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.48■□□□□ 0.07
HMGCS1Q01581 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 SPTSSB-204ENST00000617024 1292 ntBASIC15.48■□□□□ 0.07
HMGCS1Q01581 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGCS1Q01581 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGCS1Q01581 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 AC092127.1-201ENST00000567093 3455 ntBASIC15.47■□□□□ 0.07
HMGCS1Q01581 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.47■□□□□ 0.07
HMGCS1Q01581 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 PGAM5P1-201ENST00000518923 814 ntBASIC15.47■□□□□ 0.07
HMGCS1Q01581 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 AC027307.2-201ENST00000591252 911 ntBASIC15.47■□□□□ 0.07
HMGCS1Q01581 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 AC018892.3-201ENST00000623986 2499 ntBASIC15.47■□□□□ 0.07
HMGCS1Q01581 AC092902.6-201ENST00000641783 218 ntBASIC15.47■□□□□ 0.07
HMGCS1Q01581 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGCS1Q01581 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGCS1Q01581 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms