Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.63□□□□□ -0.07
CACNA1BQ00975 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AP002803.1-201ENST00000528836 498 ntBASIC14.63□□□□□ -0.07
CACNA1BQ00975 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AC011247.3-201ENST00000603297 438 ntBASIC14.63□□□□□ -0.07
CACNA1BQ00975 MIR6125-201ENST00000618986 96 ntBASIC14.63□□□□□ -0.07
CACNA1BQ00975 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 KRT18P55-202ENST00000578578 1546 ntBASIC14.63□□□□□ -0.07
CACNA1BQ00975 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AL136982.4-201ENST00000437689 1740 ntBASIC14.63□□□□□ -0.07
CACNA1BQ00975 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 KRT8P35-201ENST00000483942 1338 ntBASIC14.63□□□□□ -0.07
CACNA1BQ00975 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1BQ00975 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 AC015912.3-201ENST00000619432 348 ntBASIC14.63□□□□□ -0.07
CACNA1BQ00975 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.63□□□□□ -0.07
CACNA1BQ00975 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 TNXA-203ENST00000507684 2038 ntBASIC14.62□□□□□ -0.07
CACNA1BQ00975 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 AC244197.1-201ENST00000456494 951 ntBASIC14.62□□□□□ -0.07
CACNA1BQ00975 AC024293.1-201ENST00000467930 498 ntBASIC14.62□□□□□ -0.07
CACNA1BQ00975 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1BQ00975 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.62□□□□□ -0.07
CACNA1BQ00975 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1BQ00975 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CACNA1BQ00975 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.61□□□□□ -0.07
CACNA1BQ00975 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1BQ00975 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.61□□□□□ -0.07
CACNA1BQ00975 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.61□□□□□ -0.07
CACNA1BQ00975 LINC01451-201ENST00000623792 534 ntBASIC14.61□□□□□ -0.07
CACNA1BQ00975 AC004554.1-201ENST00000422830 1468 ntBASIC14.61□□□□□ -0.07
CACNA1BQ00975 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1BQ00975 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1BQ00975 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms