Protein–RNA interactions for Protein: P62136

PPP1CA, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CAP62136 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PPP1CAP62136 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.3■□□□□ 0.04
PPP1CAP62136 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.3■□□□□ 0.04
PPP1CAP62136 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.3■□□□□ 0.04
PPP1CAP62136 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
PPP1CAP62136 RPL13P2-201ENST00000440687 659 ntBASIC15.3■□□□□ 0.04
PPP1CAP62136 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.3■□□□□ 0.04
PPP1CAP62136 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PPP1CAP62136 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.3■□□□□ 0.04
PPP1CAP62136 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 AC055876.2-201ENST00000531834 546 ntBASIC15.3■□□□□ 0.04
PPP1CAP62136 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.3■□□□□ 0.04
PPP1CAP62136 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PPP1CAP62136 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.3■□□□□ 0.04
PPP1CAP62136 HNRNPUP1-201ENST00000554987 333 ntBASIC15.3■□□□□ 0.04
PPP1CAP62136 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.3■□□□□ 0.04
PPP1CAP62136 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.3■□□□□ 0.04
PPP1CAP62136 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
PPP1CAP62136 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.3■□□□□ 0.04
PPP1CAP62136 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.3■□□□□ 0.04
PPP1CAP62136 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.3■□□□□ 0.04
PPP1CAP62136 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PPP1CAP62136 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PPP1CAP62136 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.29■□□□□ 0.04
PPP1CAP62136 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1CAP62136 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 MIR648-201ENST00000385046 94 ntBASIC15.29■□□□□ 0.04
PPP1CAP62136 NME2P1-201ENST00000426182 414 ntBASIC15.29■□□□□ 0.04
PPP1CAP62136 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.29■□□□□ 0.04
PPP1CAP62136 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1CAP62136 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PPP1CAP62136 TIMM17BP1-201ENST00000545713 516 ntBASIC15.29■□□□□ 0.04
PPP1CAP62136 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.29■□□□□ 0.04
PPP1CAP62136 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.29■□□□□ 0.04
PPP1CAP62136 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1CAP62136 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.29■□□□□ 0.04
PPP1CAP62136 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.29■□□□□ 0.04
PPP1CAP62136 MIR8072-201ENST00000614241 80 ntBASIC15.29■□□□□ 0.04
PPP1CAP62136 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PPP1CAP62136 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PPP1CAP62136 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1CAP62136 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PPP1CAP62136 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PPP1CAP62136 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1CAP62136 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PPP1CAP62136 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1CAP62136 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.29■□□□□ 0.04
PPP1CAP62136 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PPP1CAP62136 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PPP1CAP62136 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.28■□□□□ 0.04
PPP1CAP62136 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PPP1CAP62136 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.28■□□□□ 0.04
PPP1CAP62136 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 AL118508.1-201ENST00000613502 2345 ntBASIC15.28■□□□□ 0.04
PPP1CAP62136 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP1CAP62136 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP1CAP62136 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PPP1CAP62136 AL391825.1-201ENST00000457671 1364 ntBASIC15.28■□□□□ 0.04
PPP1CAP62136 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PPP1CAP62136 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP1CAP62136 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP1CAP62136 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.28■□□□□ 0.04
PPP1CAP62136 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms