Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC074338.1-201ENST00000416825 156 ntBASIC15.78■□□□□ 0.12
CLDN2P57739 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN2P57739 TARDBPP1-201ENST00000442013 1203 ntBASIC15.78■□□□□ 0.12
CLDN2P57739 RN7SL837P-201ENST00000463010 287 ntBASIC15.78■□□□□ 0.12
CLDN2P57739 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN2P57739 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN2P57739 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN2P57739 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN2P57739 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN2P57739 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN2P57739 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
CLDN2P57739 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN2P57739 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN2P57739 CLK3P2-201ENST00000427566 1453 ntBASIC15.78■□□□□ 0.12
CLDN2P57739 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN2P57739 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 CDC14C-201ENST00000428251 1719 ntBASIC15.77■□□□□ 0.12
CLDN2P57739 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLDN2P57739 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN2P57739 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN2P57739 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN2P57739 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDN2P57739 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDN2P57739 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.77■□□□□ 0.12
CLDN2P57739 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDN2P57739 RARRES2P5-201ENST00000564013 466 ntBASIC15.77■□□□□ 0.12
CLDN2P57739 WFDC1-204ENST00000613603 549 ntBASIC15.77■□□□□ 0.12
CLDN2P57739 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN2P57739 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN2P57739 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDN2P57739 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN2P57739 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN2P57739 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CLDN2P57739 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDN2P57739 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDN2P57739 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDN2P57739 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
CLDN2P57739 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.77■□□□□ 0.11
CLDN2P57739 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN2P57739 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN2P57739 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN2P57739 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN2P57739 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN2P57739 AC006449.6-201ENST00000612330 2296 ntBASIC15.77■□□□□ 0.11
CLDN2P57739 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN2P57739 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLDN2P57739 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
CLDN2P57739 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN2P57739 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN2P57739 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CLDN2P57739 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 RPL13P2-201ENST00000440687 659 ntBASIC15.76■□□□□ 0.11
CLDN2P57739 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN2P57739 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN2P57739 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN2P57739 HILS1-202ENST00000545329 423 ntBASIC15.76■□□□□ 0.11
CLDN2P57739 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDN2P57739 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN2P57739 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
CLDN2P57739 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN2P57739 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDN2P57739 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN2P57739 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN2P57739 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN2P57739 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms