Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 PDPK2P-202ENST00000562415 1191 ntBASIC15.73■□□□□ 0.11
CDH13P55290 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH13P55290 AC092865.6-201ENST00000642101 219 ntBASIC15.73■□□□□ 0.11
CDH13P55290 AC067930.6-201ENST00000623257 4947 ntBASIC15.73■□□□□ 0.11
CDH13P55290 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH13P55290 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CDH13P55290 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CDH13P55290 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH13P55290 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH13P55290 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH13P55290 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH13P55290 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH13P55290 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH13P55290 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH13P55290 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH13P55290 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH13P55290 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDH13P55290 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.72■□□□□ 0.11
CDH13P55290 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDH13P55290 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH13P55290 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH13P55290 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH13P55290 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH13P55290 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH13P55290 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CDH13P55290 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH13P55290 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH13P55290 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CDH13P55290 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH13P55290 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CDH13P55290 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH13P55290 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.71■□□□□ 0.11
CDH13P55290 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH13P55290 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.71■□□□□ 0.11
CDH13P55290 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 AC099522.2-201ENST00000607001 744 ntBASIC15.71■□□□□ 0.11
CDH13P55290 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH13P55290 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH13P55290 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH13P55290 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH13P55290 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH13P55290 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH13P55290 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.71■□□□□ 0.1
CDH13P55290 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.71■□□□□ 0.1
CDH13P55290 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH13P55290 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.71■□□□□ 0.1
CDH13P55290 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 307.6 ms