Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 BCYRN1-201ENST00000418539 200 ntBASIC22.49■■□□□ 1.19
CLTCL1P53675 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC22.49■■□□□ 1.19
CLTCL1P53675 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC22.49■■□□□ 1.19
CLTCL1P53675 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CLTCL1P53675 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC22.49■■□□□ 1.19
CLTCL1P53675 ECM1P1-201ENST00000604092 1279 ntBASIC22.49■■□□□ 1.19
CLTCL1P53675 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC22.49■■□□□ 1.19
CLTCL1P53675 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLTCL1P53675 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC22.48■■□□□ 1.19
CLTCL1P53675 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLTCL1P53675 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLTCL1P53675 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLTCL1P53675 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC22.48■■□□□ 1.19
CLTCL1P53675 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CLTCL1P53675 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CLTCL1P53675 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC22.48■■□□□ 1.19
CLTCL1P53675 AGER-214ENST00000538695 487 ntTSL 2 BASIC22.48■■□□□ 1.19
CLTCL1P53675 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC22.48■■□□□ 1.19
CLTCL1P53675 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC22.48■■□□□ 1.19
CLTCL1P53675 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CLTCL1P53675 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLTCL1P53675 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC22.48■■□□□ 1.19
CLTCL1P53675 FOS-202ENST00000535987 1402 ntTSL 2 BASIC22.48■■□□□ 1.19
CLTCL1P53675 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLTCL1P53675 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLTCL1P53675 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC22.48■■□□□ 1.19
CLTCL1P53675 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC22.48■■□□□ 1.19
CLTCL1P53675 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLTCL1P53675 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CLTCL1P53675 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLTCL1P53675 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLTCL1P53675 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLTCL1P53675 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CLTCL1P53675 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC22.47■■□□□ 1.19
CLTCL1P53675 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC22.47■■□□□ 1.19
CLTCL1P53675 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC22.47■■□□□ 1.19
CLTCL1P53675 AC026471.1-201ENST00000564629 3026 ntBASIC22.47■■□□□ 1.19
CLTCL1P53675 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CLTCL1P53675 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.47■■□□□ 1.19
CLTCL1P53675 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC22.47■■□□□ 1.19
CLTCL1P53675 AHRR-211ENST00000515206 462 ntTSL 5 BASIC22.47■■□□□ 1.19
CLTCL1P53675 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC22.47■■□□□ 1.19
CLTCL1P53675 AC145423.3-201ENST00000615987 467 ntBASIC22.47■■□□□ 1.19
CLTCL1P53675 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLTCL1P53675 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLTCL1P53675 KRT8P35-201ENST00000483942 1338 ntBASIC22.47■■□□□ 1.19
CLTCL1P53675 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLTCL1P53675 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLTCL1P53675 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC22.47■■□□□ 1.19
CLTCL1P53675 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLTCL1P53675 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC22.47■■□□□ 1.19
CLTCL1P53675 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.47■■□□□ 1.19
CLTCL1P53675 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 ACKR1-201ENST00000368121 1240 ntBASIC22.46■■□□□ 1.19
CLTCL1P53675 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 C2orf27AP3-201ENST00000434123 579 ntBASIC22.46■■□□□ 1.19
CLTCL1P53675 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC22.46■■□□□ 1.19
CLTCL1P53675 IGHV3OR16-16-201ENST00000563644 343 ntBASIC22.46■■□□□ 1.19
CLTCL1P53675 AL354718.3-201ENST00000616414 581 ntBASIC22.46■■□□□ 1.19
CLTCL1P53675 CR382287.1-201ENST00000623954 586 ntBASIC22.46■■□□□ 1.19
CLTCL1P53675 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC22.46■■□□□ 1.19
CLTCL1P53675 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 FRMD6-AS1-201ENST00000617151 2229 ntBASIC22.46■■□□□ 1.19
CLTCL1P53675 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CLTCL1P53675 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC22.46■■□□□ 1.19
CLTCL1P53675 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC22.46■■□□□ 1.19
CLTCL1P53675 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC22.46■■□□□ 1.19
CLTCL1P53675 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CLTCL1P53675 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CLTCL1P53675 CNN2P10-201ENST00000443067 918 ntBASIC22.46■■□□□ 1.19
CLTCL1P53675 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLTCL1P53675 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC22.46■■□□□ 1.19
CLTCL1P53675 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC22.46■■□□□ 1.19
CLTCL1P53675 AP003171.2-201ENST00000528208 925 ntBASIC22.46■■□□□ 1.19
CLTCL1P53675 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC22.46■■□□□ 1.19
CLTCL1P53675 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC22.46■■□□□ 1.19
CLTCL1P53675 PRKN-211ENST00000615065 261 ntTSL 5 BASIC22.46■■□□□ 1.19
CLTCL1P53675 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC22.46■■□□□ 1.19
CLTCL1P53675 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CLTCL1P53675 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CLTCL1P53675 AC148477.4-201ENST00000613430 1793 ntBASIC22.45■■□□□ 1.19
CLTCL1P53675 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CLTCL1P53675 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms