Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNA4P52798 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNA4P52798 MIR658-201ENST00000385210 100 ntBASIC13.38□□□□□ -0.27
EFNA4P52798 MIR1909-201ENST00000411312 80 ntBASIC13.38□□□□□ -0.27
EFNA4P52798 KRT43P-201ENST00000434019 910 ntBASIC13.38□□□□□ -0.27
EFNA4P52798 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNA4P52798 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNA4P52798 AL162726.2-201ENST00000438986 1017 ntBASIC13.38□□□□□ -0.27
EFNA4P52798 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNA4P52798 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.38□□□□□ -0.27
EFNA4P52798 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNA4P52798 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNA4P52798 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.38□□□□□ -0.27
EFNA4P52798 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNA4P52798 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNA4P52798 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 KRT8P22-201ENST00000562317 1415 ntBASIC13.38□□□□□ -0.27
EFNA4P52798 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA4P52798 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 AC080080.1-201ENST00000625121 2420 ntBASIC13.38□□□□□ -0.27
EFNA4P52798 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
EFNA4P52798 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA4P52798 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA4P52798 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 AC084018.2-201ENST00000613093 2607 ntBASIC13.37□□□□□ -0.27
EFNA4P52798 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
EFNA4P52798 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA4P52798 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA4P52798 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
EFNA4P52798 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 BOLA2P3-201ENST00000404566 256 ntBASIC13.37□□□□□ -0.27
EFNA4P52798 TOMM22P5-201ENST00000416399 439 ntBASIC13.37□□□□□ -0.27
EFNA4P52798 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNA4P52798 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNA4P52798 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 FAM86LP-201ENST00000478302 853 ntBASIC13.37□□□□□ -0.27
EFNA4P52798 RPL13AP25-201ENST00000484130 612 ntBASIC13.37□□□□□ -0.27
EFNA4P52798 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNA4P52798 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.37□□□□□ -0.27
EFNA4P52798 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA4P52798 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA4P52798 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNA4P52798 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms