Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
GTF2A1P52655 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
GTF2A1P52655 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.8■□□□□ 0.12
GTF2A1P52655 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 AL135905.2-201ENST00000584934 1404 ntBASIC15.79■□□□□ 0.12
GTF2A1P52655 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 BX640514.1-201ENST00000583223 1918 ntBASIC15.79■□□□□ 0.12
GTF2A1P52655 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.79■□□□□ 0.12
GTF2A1P52655 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.79■□□□□ 0.12
GTF2A1P52655 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.79■□□□□ 0.12
GTF2A1P52655 MIR3180-4-201ENST00000582223 153 ntBASIC15.79■□□□□ 0.12
GTF2A1P52655 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GTF2A1P52655 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
GTF2A1P52655 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GTF2A1P52655 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GTF2A1P52655 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
GTF2A1P52655 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.78■□□□□ 0.12
GTF2A1P52655 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
GTF2A1P52655 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
GTF2A1P52655 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 AC092135.3-201ENST00000624151 1846 ntBASIC15.78■□□□□ 0.12
GTF2A1P52655 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
GTF2A1P52655 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms