Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CNN2P10-201ENST00000443067 918 ntBASIC17.57■□□□□ 0.4
BRCA2P51587 AL596276.2-201ENST00000447525 331 ntBASIC17.57■□□□□ 0.4
BRCA2P51587 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.57■□□□□ 0.4
BRCA2P51587 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.57■□□□□ 0.4
BRCA2P51587 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.57■□□□□ 0.4
BRCA2P51587 HYMAI-201ENST00000635591 3347 ntBASIC17.57■□□□□ 0.4
BRCA2P51587 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.57■□□□□ 0.4
BRCA2P51587 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.57■□□□□ 0.4
BRCA2P51587 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.57■□□□□ 0.4
BRCA2P51587 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.57■□□□□ 0.4
BRCA2P51587 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.57■□□□□ 0.4
BRCA2P51587 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BRCA2P51587 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 AC080080.1-201ENST00000625121 2420 ntBASIC17.57■□□□□ 0.4
BRCA2P51587 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BRCA2P51587 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.57■□□□□ 0.4
BRCA2P51587 RNA5SP486-201ENST00000515961 83 ntBASIC17.57■□□□□ 0.4
BRCA2P51587 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.57■□□□□ 0.4
BRCA2P51587 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 AC025181.2-201ENST00000606994 802 ntBASIC17.57■□□□□ 0.4
BRCA2P51587 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCA2P51587 AC078925.2-201ENST00000624013 1973 ntBASIC17.57■□□□□ 0.4
BRCA2P51587 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.57■□□□□ 0.4
BRCA2P51587 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
BRCA2P51587 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BRCA2P51587 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.56■□□□□ 0.4
BRCA2P51587 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 AC135983.4-201ENST00000564116 1262 ntBASIC17.56■□□□□ 0.4
BRCA2P51587 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.56■□□□□ 0.4
BRCA2P51587 COX6A1P2-201ENST00000620597 330 ntBASIC17.56■□□□□ 0.4
BRCA2P51587 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.56■□□□□ 0.4
BRCA2P51587 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.56■□□□□ 0.4
BRCA2P51587 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.56■□□□□ 0.4
BRCA2P51587 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
BRCA2P51587 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
BRCA2P51587 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.56■□□□□ 0.4
BRCA2P51587 NPM1P43-201ENST00000558669 786 ntBASIC17.56■□□□□ 0.4
BRCA2P51587 RN7SL48P-201ENST00000579283 293 ntBASIC17.56■□□□□ 0.4
BRCA2P51587 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BRCA2P51587 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.56■□□□□ 0.4
BRCA2P51587 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
BRCA2P51587 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.56■□□□□ 0.4
BRCA2P51587 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.56■□□□□ 0.4
BRCA2P51587 AC234782.1-201ENST00000451950 919 ntBASIC17.56■□□□□ 0.4
BRCA2P51587 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.56■□□□□ 0.4
BRCA2P51587 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCA2P51587 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.56■□□□□ 0.4
BRCA2P51587 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.56■□□□□ 0.4
BRCA2P51587 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
BRCA2P51587 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.55■□□□□ 0.4
BRCA2P51587 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.55■□□□□ 0.4
BRCA2P51587 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.55■□□□□ 0.4
BRCA2P51587 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.55■□□□□ 0.4
BRCA2P51587 MIR1227-201ENST00000408484 88 ntBASIC17.55■□□□□ 0.4
BRCA2P51587 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.55■□□□□ 0.4
BRCA2P51587 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.55■□□□□ 0.4
BRCA2P51587 RN7SL774P-201ENST00000577467 290 ntBASIC17.55■□□□□ 0.4
BRCA2P51587 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.55■□□□□ 0.4
BRCA2P51587 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.55■□□□□ 0.4
BRCA2P51587 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
BRCA2P51587 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms