Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 NUP210P1-202ENST00000504322 710 ntBASIC17.75■□□□□ 0.43
CENPFP49454 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CENPFP49454 AC023310.1-201ENST00000554836 735 ntBASIC17.75■□□□□ 0.43
CENPFP49454 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPFP49454 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPFP49454 AC073352.2-201ENST00000609385 439 ntBASIC17.75■□□□□ 0.43
CENPFP49454 YRDCP1-201ENST00000621419 643 ntBASIC17.75■□□□□ 0.43
CENPFP49454 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CENPFP49454 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CENPFP49454 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 MIR1202-201ENST00000408529 83 ntBASIC17.74■□□□□ 0.43
CENPFP49454 ACTG1P2-201ENST00000415776 1125 ntBASIC17.74■□□□□ 0.43
CENPFP49454 ACTG1P11-201ENST00000425411 1125 ntBASIC17.74■□□□□ 0.43
CENPFP49454 AC093433.1-201ENST00000458048 571 ntBASIC17.74■□□□□ 0.43
CENPFP49454 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CENPFP49454 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.74■□□□□ 0.43
CENPFP49454 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.74■□□□□ 0.43
CENPFP49454 AL645608.8-201ENST00000606034 2086 ntBASIC17.74■□□□□ 0.43
CENPFP49454 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CENPFP49454 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 AC024681.1-201ENST00000521917 487 ntBASIC17.74■□□□□ 0.43
CENPFP49454 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.74■□□□□ 0.43
CENPFP49454 AC006453.4-201ENST00000636949 1252 ntBASIC17.74■□□□□ 0.43
CENPFP49454 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CENPFP49454 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CENPFP49454 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.74■□□□□ 0.43
CENPFP49454 CEP164P1-201ENST00000455142 418 ntBASIC17.74■□□□□ 0.43
CENPFP49454 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CENPFP49454 PRKXP1-201ENST00000561423 1122 ntBASIC17.74■□□□□ 0.43
CENPFP49454 RN7SL736P-201ENST00000613111 269 ntBASIC17.74■□□□□ 0.43
CENPFP49454 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CENPFP49454 AC105020.1-201ENST00000435356 2205 ntBASIC17.73■□□□□ 0.43
CENPFP49454 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.73■□□□□ 0.43
CENPFP49454 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CENPFP49454 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.73■□□□□ 0.43
CENPFP49454 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.73■□□□□ 0.43
CENPFP49454 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.73■□□□□ 0.43
CENPFP49454 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.73■□□□□ 0.43
CENPFP49454 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.73■□□□□ 0.43
CENPFP49454 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.73■□□□□ 0.43
CENPFP49454 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.73■□□□□ 0.43
CENPFP49454 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CENPFP49454 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.73■□□□□ 0.43
CENPFP49454 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CENPFP49454 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CENPFP49454 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CENPFP49454 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CENPFP49454 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CENPFP49454 MIR769-201ENST00000390225 118 ntBASIC17.73■□□□□ 0.43
CENPFP49454 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.73■□□□□ 0.43
CENPFP49454 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.73■□□□□ 0.43
CENPFP49454 COX5BP1-201ENST00000507622 393 ntBASIC17.73■□□□□ 0.43
CENPFP49454 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.73■□□□□ 0.43
CENPFP49454 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CENPFP49454 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CENPFP49454 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.72■□□□□ 0.43
CENPFP49454 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CENPFP49454 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CENPFP49454 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.72■□□□□ 0.43
CENPFP49454 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.72■□□□□ 0.43
CENPFP49454 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.72■□□□□ 0.43
CENPFP49454 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.72■□□□□ 0.43
CENPFP49454 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
CENPFP49454 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.72■□□□□ 0.43
CENPFP49454 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CENPFP49454 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.72■□□□□ 0.43
CENPFP49454 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.72■□□□□ 0.43
CENPFP49454 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.72■□□□□ 0.43
CENPFP49454 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.72■□□□□ 0.43
CENPFP49454 CTBP2P4-201ENST00000513884 920 ntBASIC17.72■□□□□ 0.43
CENPFP49454 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.72■□□□□ 0.43
CENPFP49454 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.72■□□□□ 0.43
CENPFP49454 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CENPFP49454 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CENPFP49454 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms