Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.98■□□□□ 0.31
BRCC3P46736 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 RN7SL837P-201ENST00000463010 287 ntBASIC16.98■□□□□ 0.31
BRCC3P46736 GIMAP3P-201ENST00000495150 836 ntBASIC16.98■□□□□ 0.31
BRCC3P46736 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.98■□□□□ 0.31
BRCC3P46736 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
BRCC3P46736 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.98■□□□□ 0.31
BRCC3P46736 WFDC1-204ENST00000613603 549 ntBASIC16.98■□□□□ 0.31
BRCC3P46736 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 AL596087.1-201ENST00000400979 1969 ntBASIC16.98■□□□□ 0.31
BRCC3P46736 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
BRCC3P46736 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
BRCC3P46736 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.97■□□□□ 0.31
BRCC3P46736 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.97■□□□□ 0.31
BRCC3P46736 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BRCC3P46736 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 PRORSD1P-202ENST00000563365 2154 ntBASIC16.97■□□□□ 0.31
BRCC3P46736 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.97■□□□□ 0.31
BRCC3P46736 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 AL512384.1-201ENST00000406683 331 ntBASIC16.97■□□□□ 0.31
BRCC3P46736 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 RRP7BP-205ENST00000566851 833 ntBASIC16.97■□□□□ 0.31
BRCC3P46736 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.97■□□□□ 0.31
BRCC3P46736 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BRCC3P46736 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
BRCC3P46736 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BRCC3P46736 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.97■□□□□ 0.31
BRCC3P46736 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BRCC3P46736 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.97■□□□□ 0.31
BRCC3P46736 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.96■□□□□ 0.31
BRCC3P46736 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.96■□□□□ 0.31
BRCC3P46736 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.96■□□□□ 0.31
BRCC3P46736 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
BRCC3P46736 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 OR8S1-201ENST00000310194 1080 ntBASIC16.96■□□□□ 0.31
BRCC3P46736 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
BRCC3P46736 MIR648-201ENST00000385046 94 ntBASIC16.96■□□□□ 0.31
BRCC3P46736 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.96■□□□□ 0.31
BRCC3P46736 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.96■□□□□ 0.31
BRCC3P46736 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 RN7SL399P-201ENST00000471648 279 ntBASIC16.96■□□□□ 0.31
BRCC3P46736 AC011495.1-201ENST00000498085 584 ntBASIC16.96■□□□□ 0.31
BRCC3P46736 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.96■□□□□ 0.31
BRCC3P46736 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.96■□□□□ 0.31
BRCC3P46736 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.96■□□□□ 0.31
BRCC3P46736 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.96■□□□□ 0.31
BRCC3P46736 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
BRCC3P46736 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
BRCC3P46736 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
BRCC3P46736 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRCC3P46736 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
BRCC3P46736 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BRCC3P46736 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
BRCC3P46736 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.96■□□□□ 0.3
BRCC3P46736 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms