Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CHRNA4P43681 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CHRNA4P43681 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 TSEN15P1-201ENST00000423257 515 ntBASIC16.18■□□□□ 0.18
CHRNA4P43681 AL353705.2-201ENST00000428243 662 ntBASIC16.18■□□□□ 0.18
CHRNA4P43681 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA4P43681 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA4P43681 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 AP001160.2-201ENST00000596071 487 ntBASIC16.18■□□□□ 0.18
CHRNA4P43681 AP001059.3-201ENST00000619053 235 ntBASIC16.18■□□□□ 0.18
CHRNA4P43681 LINC00628-201ENST00000628516 1289 ntBASIC16.18■□□□□ 0.18
CHRNA4P43681 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHRNA4P43681 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA4P43681 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA4P43681 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
CHRNA4P43681 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA4P43681 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA4P43681 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA4P43681 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA4P43681 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHRNA4P43681 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.17■□□□□ 0.18
CHRNA4P43681 REXO1L1P-202ENST00000608646 1974 ntBASIC16.17■□□□□ 0.18
CHRNA4P43681 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA4P43681 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHRNA4P43681 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA4P43681 AC004987.2-201ENST00000395959 1148 ntBASIC16.17■□□□□ 0.18
CHRNA4P43681 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA4P43681 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CHRNA4P43681 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA4P43681 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA4P43681 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 AC092850.2-201ENST00000623821 2697 ntBASIC16.17■□□□□ 0.18
CHRNA4P43681 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA4P43681 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA4P43681 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA4P43681 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.16■□□□□ 0.18
CHRNA4P43681 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CHRNA4P43681 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.16■□□□□ 0.18
CHRNA4P43681 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.16■□□□□ 0.18
CHRNA4P43681 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.16■□□□□ 0.18
CHRNA4P43681 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CHRNA4P43681 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.16■□□□□ 0.18
CHRNA4P43681 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.16■□□□□ 0.18
CHRNA4P43681 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.16■□□□□ 0.18
CHRNA4P43681 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA4P43681 HLA-J-203ENST00000494367 1087 ntBASIC16.16■□□□□ 0.18
CHRNA4P43681 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.16■□□□□ 0.18
CHRNA4P43681 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.16■□□□□ 0.18
CHRNA4P43681 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.16■□□□□ 0.18
CHRNA4P43681 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA4P43681 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA4P43681 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CHRNA4P43681 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CHRNA4P43681 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA4P43681 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
CHRNA4P43681 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms