Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.28□□□□□ -0.28
SNCAP37840 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.28□□□□□ -0.28
SNCAP37840 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.28□□□□□ -0.28
SNCAP37840 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SNCAP37840 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 CICP14-201ENST00000629111 2732 ntBASIC13.28□□□□□ -0.28
SNCAP37840 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SNCAP37840 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SNCAP37840 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.27□□□□□ -0.28
SNCAP37840 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.27□□□□□ -0.28
SNCAP37840 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
SNCAP37840 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCAP37840 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SNCAP37840 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCAP37840 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.27□□□□□ -0.28
SNCAP37840 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.27□□□□□ -0.28
SNCAP37840 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCAP37840 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.27□□□□□ -0.28
SNCAP37840 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
SNCAP37840 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCAP37840 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCAP37840 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SNCAP37840 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.27□□□□□ -0.29
SNCAP37840 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.27□□□□□ -0.29
SNCAP37840 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
SNCAP37840 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.27□□□□□ -0.29
SNCAP37840 PAWRP1-201ENST00000451083 565 ntBASIC13.27□□□□□ -0.29
SNCAP37840 AC087163.2-201ENST00000457299 853 ntBASIC13.27□□□□□ -0.29
SNCAP37840 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.27□□□□□ -0.29
SNCAP37840 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.27□□□□□ -0.29
SNCAP37840 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 MIR3652-201ENST00000579335 131 ntBASIC13.27□□□□□ -0.29
SNCAP37840 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.27□□□□□ -0.29
SNCAP37840 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.27□□□□□ -0.29
SNCAP37840 MTDHP4-201ENST00000600287 670 ntBASIC13.27□□□□□ -0.29
SNCAP37840 AL732292.2-201ENST00000609649 430 ntBASIC13.27□□□□□ -0.29
SNCAP37840 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.27□□□□□ -0.29
SNCAP37840 AC067750.1-201ENST00000608826 6545 ntBASIC13.27□□□□□ -0.29
SNCAP37840 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.27□□□□□ -0.29
SNCAP37840 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.27□□□□□ -0.29
SNCAP37840 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SNCAP37840 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.27□□□□□ -0.29
SNCAP37840 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.27□□□□□ -0.29
SNCAP37840 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.27□□□□□ -0.29
SNCAP37840 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SNCAP37840 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SNCAP37840 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 AL031731.1-201ENST00000642131 2094 ntBASIC13.27□□□□□ -0.29
SNCAP37840 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SNCAP37840 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCAP37840 CICP23-201ENST00000605013 2741 ntBASIC13.26□□□□□ -0.29
SNCAP37840 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms