Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.6■□□□□ 0.41
KRT9P35527 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT9P35527 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.6■□□□□ 0.41
KRT9P35527 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT9P35527 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 AC063926.3-201ENST00000624734 5658 ntBASIC17.59■□□□□ 0.41
KRT9P35527 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
KRT9P35527 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KRT9P35527 LINC02228-204ENST00000642115 2962 ntBASIC17.59■□□□□ 0.41
KRT9P35527 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 AL109954.1-202ENST00000564051 2148 ntBASIC17.59■□□□□ 0.41
KRT9P35527 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
KRT9P35527 AC011477.6-201ENST00000604980 1927 ntBASIC17.59■□□□□ 0.41
KRT9P35527 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KRT9P35527 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT9P35527 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
KRT9P35527 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT9P35527 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
KRT9P35527 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.59■□□□□ 0.41
KRT9P35527 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 AC074386.1-202ENST00000463561 864 ntBASIC17.59■□□□□ 0.41
KRT9P35527 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.59■□□□□ 0.41
KRT9P35527 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.59■□□□□ 0.41
KRT9P35527 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.59■□□□□ 0.41
KRT9P35527 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT9P35527 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT9P35527 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KRT9P35527 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT9P35527 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT9P35527 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
KRT9P35527 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT9P35527 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT9P35527 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT9P35527 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT9P35527 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.58■□□□□ 0.41
KRT9P35527 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KRT9P35527 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.58■□□□□ 0.41
KRT9P35527 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KRT9P35527 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT9P35527 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
KRT9P35527 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT9P35527 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT9P35527 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT9P35527 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
KRT9P35527 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.58■□□□□ 0.4
KRT9P35527 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT9P35527 AC092474.2-201ENST00000424288 719 ntBASIC17.58■□□□□ 0.4
KRT9P35527 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.58■□□□□ 0.4
KRT9P35527 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT9P35527 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 PDPK2P-202ENST00000562415 1191 ntBASIC17.58■□□□□ 0.4
KRT9P35527 AL513190.1-201ENST00000621254 727 ntBASIC17.58■□□□□ 0.4
KRT9P35527 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT9P35527 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
KRT9P35527 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT9P35527 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT9P35527 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT9P35527 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT9P35527 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRT9P35527 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms