Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSP1P33241 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSP1P33241 NCF1C-201ENST00000438382 1427 ntBASIC16.16■□□□□ 0.18
LSP1P33241 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSP1P33241 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LSP1P33241 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSP1P33241 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSP1P33241 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.16■□□□□ 0.18
LSP1P33241 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LSP1P33241 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LSP1P33241 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.16■□□□□ 0.18
LSP1P33241 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSP1P33241 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
LSP1P33241 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSP1P33241 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LSP1P33241 AC136759.1-202ENST00000530858 2194 ntBASIC16.16■□□□□ 0.18
LSP1P33241 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSP1P33241 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.15■□□□□ 0.18
LSP1P33241 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LSP1P33241 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LSP1P33241 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LSP1P33241 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.15■□□□□ 0.18
LSP1P33241 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.15■□□□□ 0.18
LSP1P33241 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 FAM210CP-201ENST00000445714 574 ntBASIC16.15■□□□□ 0.18
LSP1P33241 PAWRP1-201ENST00000451083 565 ntBASIC16.15■□□□□ 0.18
LSP1P33241 AC092647.4-201ENST00000457211 535 ntBASIC16.15■□□□□ 0.18
LSP1P33241 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.15■□□□□ 0.18
LSP1P33241 AC027601.5-201ENST00000624065 2482 ntBASIC16.15■□□□□ 0.18
LSP1P33241 AP000867.4-201ENST00000641616 219 ntBASIC16.15■□□□□ 0.18
LSP1P33241 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
LSP1P33241 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LSP1P33241 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 AL928921.2-201ENST00000641325 2442 ntBASIC16.15■□□□□ 0.18
LSP1P33241 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LSP1P33241 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSP1P33241 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
LSP1P33241 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.14■□□□□ 0.17
LSP1P33241 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.14■□□□□ 0.17
LSP1P33241 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.14■□□□□ 0.17
LSP1P33241 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.14■□□□□ 0.17
LSP1P33241 AC246785.2-201ENST00000432512 513 ntBASIC16.14■□□□□ 0.17
LSP1P33241 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.14■□□□□ 0.17
LSP1P33241 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LSP1P33241 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.14■□□□□ 0.17
LSP1P33241 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.14■□□□□ 0.17
LSP1P33241 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.14■□□□□ 0.17
LSP1P33241 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.14■□□□□ 0.17
LSP1P33241 AC011558.1-201ENST00000623459 338 ntBASIC16.14■□□□□ 0.17
LSP1P33241 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.14■□□□□ 0.17
LSP1P33241 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.14■□□□□ 0.17
LSP1P33241 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.14■□□□□ 0.17
LSP1P33241 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 TP73-AS1-210ENST00000637775 1455 ntBASIC16.14■□□□□ 0.17
LSP1P33241 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.14■□□□□ 0.17
LSP1P33241 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.14■□□□□ 0.17
LSP1P33241 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.14■□□□□ 0.17
LSP1P33241 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 FLJ16779-201ENST00000612722 7638 ntBASIC16.14■□□□□ 0.17
LSP1P33241 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms