Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHRNB4P30926 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB4P30926 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHRNB4P30926 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.22□□□□□ -0.13
CHRNB4P30926 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.22□□□□□ -0.13
CHRNB4P30926 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
CHRNB4P30926 TMEM261P1-201ENST00000604899 340 ntBASIC14.22□□□□□ -0.13
CHRNB4P30926 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB4P30926 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CHRNB4P30926 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CHRNB4P30926 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB4P30926 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB4P30926 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB4P30926 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 AL589987.1-201ENST00000453380 819 ntBASIC14.21□□□□□ -0.13
CHRNB4P30926 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB4P30926 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB4P30926 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.21□□□□□ -0.13
CHRNB4P30926 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB4P30926 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB4P30926 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.21□□□□□ -0.13
CHRNB4P30926 MIR4321-201ENST00000592276 80 ntBASIC14.21□□□□□ -0.13
CHRNB4P30926 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB4P30926 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHRNB4P30926 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB4P30926 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB4P30926 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB4P30926 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB4P30926 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB4P30926 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB4P30926 LINC01144-201ENST00000626198 1710 ntBASIC14.21□□□□□ -0.14
CHRNB4P30926 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB4P30926 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB4P30926 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
CHRNB4P30926 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB4P30926 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB4P30926 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
CHRNB4P30926 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB4P30926 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CHRNB4P30926 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
CHRNB4P30926 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CHRNB4P30926 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB4P30926 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms