Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
ABCD3P28288 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCD3P28288 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ABCD3P28288 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ABCD3P28288 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.78□□□□□ -0.04
ABCD3P28288 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCD3P28288 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCD3P28288 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ABCD3P28288 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCD3P28288 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ABCD3P28288 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ABCD3P28288 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 KRT8P37-201ENST00000451609 1420 ntBASIC14.78□□□□□ -0.04
ABCD3P28288 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ABCD3P28288 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCD3P28288 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCD3P28288 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.78□□□□□ -0.04
ABCD3P28288 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.78□□□□□ -0.04
ABCD3P28288 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.78□□□□□ -0.04
ABCD3P28288 AC005498.2-205ENST00000593218 784 ntBASIC14.78□□□□□ -0.04
ABCD3P28288 AL390754.1-201ENST00000619088 582 ntBASIC14.78□□□□□ -0.04
ABCD3P28288 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCD3P28288 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
ABCD3P28288 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 AC010491.1-201ENST00000563101 2797 ntBASIC14.78□□□□□ -0.04
ABCD3P28288 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCD3P28288 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCD3P28288 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCD3P28288 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
ABCD3P28288 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.77□□□□□ -0.04
ABCD3P28288 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
ABCD3P28288 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ABCD3P28288 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.77□□□□□ -0.04
ABCD3P28288 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ABCD3P28288 AC100757.3-201ENST00000622361 1406 ntBASIC14.77□□□□□ -0.04
ABCD3P28288 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCD3P28288 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCD3P28288 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
ABCD3P28288 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.77□□□□□ -0.04
ABCD3P28288 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ABCD3P28288 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
ABCD3P28288 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCD3P28288 AC011477.6-201ENST00000604980 1927 ntBASIC14.77□□□□□ -0.04
ABCD3P28288 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.77□□□□□ -0.05
ABCD3P28288 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.77□□□□□ -0.05
ABCD3P28288 EEF1DP4-201ENST00000446006 880 ntBASIC14.77□□□□□ -0.05
ABCD3P28288 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.77□□□□□ -0.05
ABCD3P28288 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.77□□□□□ -0.05
ABCD3P28288 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.77□□□□□ -0.05
ABCD3P28288 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.77□□□□□ -0.05
ABCD3P28288 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.77□□□□□ -0.05
ABCD3P28288 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.77□□□□□ -0.05
ABCD3P28288 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ABCD3P28288 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.77□□□□□ -0.05
ABCD3P28288 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.77□□□□□ -0.05
ABCD3P28288 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.77□□□□□ -0.05
ABCD3P28288 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.77□□□□□ -0.05
ABCD3P28288 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
ABCD3P28288 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
ABCD3P28288 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ABCD3P28288 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.77□□□□□ -0.05
ABCD3P28288 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCD3P28288 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms