Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.53□□□□□ -0.08
GDF1P27539 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 AP001282.1-201ENST00000531301 1499 ntBASIC14.53□□□□□ -0.08
GDF1P27539 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
GDF1P27539 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
GDF1P27539 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.53□□□□□ -0.08
GDF1P27539 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.53□□□□□ -0.08
GDF1P27539 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 AC190387.1-201ENST00000551683 408 ntBASIC14.53□□□□□ -0.08
GDF1P27539 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.53□□□□□ -0.08
GDF1P27539 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.53□□□□□ -0.08
GDF1P27539 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.53□□□□□ -0.08
GDF1P27539 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.53□□□□□ -0.08
GDF1P27539 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.53□□□□□ -0.08
GDF1P27539 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
GDF1P27539 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.52□□□□□ -0.08
GDF1P27539 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.52□□□□□ -0.08
GDF1P27539 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.52□□□□□ -0.08
GDF1P27539 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.52□□□□□ -0.08
GDF1P27539 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.52□□□□□ -0.08
GDF1P27539 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
GDF1P27539 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
GDF1P27539 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
GDF1P27539 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GDF1P27539 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.52□□□□□ -0.09
GDF1P27539 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.52□□□□□ -0.09
GDF1P27539 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.52□□□□□ -0.09
GDF1P27539 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GDF1P27539 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.52□□□□□ -0.09
GDF1P27539 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.52□□□□□ -0.09
GDF1P27539 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.52□□□□□ -0.09
GDF1P27539 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.52□□□□□ -0.09
GDF1P27539 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
GDF1P27539 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.52□□□□□ -0.09
GDF1P27539 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.52□□□□□ -0.09
GDF1P27539 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.52□□□□□ -0.09
GDF1P27539 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.52□□□□□ -0.09
GDF1P27539 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GDF1P27539 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
GDF1P27539 AC134407.2-201ENST00000625089 1978 ntBASIC14.52□□□□□ -0.09
GDF1P27539 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.52□□□□□ -0.09
GDF1P27539 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDF1P27539 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms