Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMLP26374 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMLP26374 AC027612.4-201ENST00000605371 583 ntBASIC19.3■□□□□ 0.68
CHMLP26374 AC134684.3-201ENST00000641758 218 ntBASIC19.3■□□□□ 0.68
CHMLP26374 AC144831.1-201ENST00000573312 2656 ntBASIC19.3■□□□□ 0.68
CHMLP26374 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHMLP26374 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMLP26374 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.3■□□□□ 0.68
CHMLP26374 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHMLP26374 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMLP26374 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMLP26374 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHMLP26374 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.29■□□□□ 0.68
CHMLP26374 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 AZGP1P1-201ENST00000411909 902 ntBASIC19.29■□□□□ 0.68
CHMLP26374 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.29■□□□□ 0.68
CHMLP26374 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMLP26374 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMLP26374 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMLP26374 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 HNRNPUP1-201ENST00000554987 333 ntBASIC19.29■□□□□ 0.68
CHMLP26374 AC003101.2-201ENST00000612557 442 ntBASIC19.29■□□□□ 0.68
CHMLP26374 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMLP26374 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMLP26374 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMLP26374 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHMLP26374 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CHMLP26374 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHMLP26374 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMLP26374 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMLP26374 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHMLP26374 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMLP26374 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMLP26374 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMLP26374 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHMLP26374 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMLP26374 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMLP26374 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 HIST3H2BA-201ENST00000436555 524 ntBASIC19.28■□□□□ 0.68
CHMLP26374 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMLP26374 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CHMLP26374 AC007967.4-201ENST00000614700 386 ntBASIC19.28■□□□□ 0.68
CHMLP26374 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHMLP26374 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMLP26374 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHMLP26374 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMLP26374 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMLP26374 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMLP26374 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHMLP26374 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMLP26374 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMLP26374 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHMLP26374 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.27■□□□□ 0.68
CHMLP26374 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMLP26374 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMLP26374 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMLP26374 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHMLP26374 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMLP26374 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMLP26374 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMLP26374 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMLP26374 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHMLP26374 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMLP26374 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMLP26374 SPDYE17-201ENST00000412399 783 ntBASIC19.27■□□□□ 0.68
CHMLP26374 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CHMLP26374 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms