Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 AC018735.1-201ENST00000437208 1502 ntBASIC19.26■□□□□ 0.67
LMNB1P20700 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LMNB1P20700 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LMNB1P20700 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LMNB1P20700 MIR1202-201ENST00000408529 83 ntBASIC19.26■□□□□ 0.67
LMNB1P20700 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.26■□□□□ 0.67
LMNB1P20700 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.26■□□□□ 0.67
LMNB1P20700 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.26■□□□□ 0.67
LMNB1P20700 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.26■□□□□ 0.67
LMNB1P20700 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.26■□□□□ 0.67
LMNB1P20700 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 AC026410.3-201ENST00000514280 936 ntBASIC19.26■□□□□ 0.67
LMNB1P20700 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.26■□□□□ 0.67
LMNB1P20700 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.26■□□□□ 0.67
LMNB1P20700 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.26■□□□□ 0.67
LMNB1P20700 AC093813.1-201ENST00000605066 256 ntBASIC19.26■□□□□ 0.67
LMNB1P20700 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.26■□□□□ 0.67
LMNB1P20700 AC097724.1-201ENST00000609581 426 ntBASIC19.26■□□□□ 0.67
LMNB1P20700 AC132938.4-201ENST00000623835 848 ntBASIC19.26■□□□□ 0.67
LMNB1P20700 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.26■□□□□ 0.67
LMNB1P20700 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LMNB1P20700 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.26■□□□□ 0.67
LMNB1P20700 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.26■□□□□ 0.67
LMNB1P20700 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMNB1P20700 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LMNB1P20700 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNB1P20700 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
LMNB1P20700 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LMNB1P20700 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNB1P20700 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.25■□□□□ 0.67
LMNB1P20700 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNB1P20700 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNB1P20700 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNB1P20700 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNB1P20700 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNB1P20700 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNB1P20700 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNB1P20700 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNB1P20700 AC000095.1-201ENST00000603208 874 ntBASIC19.25■□□□□ 0.67
LMNB1P20700 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNB1P20700 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNB1P20700 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LMNB1P20700 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.25■□□□□ 0.67
LMNB1P20700 AC092978.1-202ENST00000637590 1327 ntBASIC19.25■□□□□ 0.67
LMNB1P20700 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNB1P20700 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNB1P20700 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNB1P20700 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.24■□□□□ 0.67
LMNB1P20700 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LMNB1P20700 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.24■□□□□ 0.67
LMNB1P20700 MAGEA5-201ENST00000446757 942 ntBASIC19.24■□□□□ 0.67
LMNB1P20700 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNB1P20700 RN7SL720P-201ENST00000488178 304 ntBASIC19.24■□□□□ 0.67
LMNB1P20700 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.24■□□□□ 0.67
LMNB1P20700 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNB1P20700 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.24■□□□□ 0.67
LMNB1P20700 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNB1P20700 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms