Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMPD1P17405 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.67■□□□□ 0.42
SMPD1P17405 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.67■□□□□ 0.42
SMPD1P17405 KRT18P43-201ENST00000469825 1281 ntBASIC17.67■□□□□ 0.42
SMPD1P17405 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.67■□□□□ 0.42
SMPD1P17405 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.67■□□□□ 0.42
SMPD1P17405 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.67■□□□□ 0.42
SMPD1P17405 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.67■□□□□ 0.42
SMPD1P17405 AC244669.2-201ENST00000612320 853 ntBASIC17.67■□□□□ 0.42
SMPD1P17405 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.67■□□□□ 0.42
SMPD1P17405 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMPD1P17405 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMPD1P17405 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.67■□□□□ 0.42
SMPD1P17405 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 AC006449.6-201ENST00000612330 2296 ntBASIC17.67■□□□□ 0.42
SMPD1P17405 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMPD1P17405 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMPD1P17405 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMPD1P17405 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.66■□□□□ 0.42
SMPD1P17405 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMPD1P17405 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMPD1P17405 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SMPD1P17405 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMPD1P17405 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.66■□□□□ 0.42
SMPD1P17405 AL355994.2-201ENST00000447882 704 ntBASIC17.66■□□□□ 0.42
SMPD1P17405 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.66■□□□□ 0.42
SMPD1P17405 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.66■□□□□ 0.42
SMPD1P17405 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.66■□□□□ 0.42
SMPD1P17405 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.66■□□□□ 0.42
SMPD1P17405 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMPD1P17405 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.66■□□□□ 0.42
SMPD1P17405 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SMPD1P17405 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMPD1P17405 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.66■□□□□ 0.42
SMPD1P17405 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.66■□□□□ 0.42
SMPD1P17405 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.66■□□□□ 0.42
SMPD1P17405 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMPD1P17405 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.66■□□□□ 0.42
SMPD1P17405 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMPD1P17405 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.65■□□□□ 0.42
SMPD1P17405 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMPD1P17405 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.65■□□□□ 0.42
SMPD1P17405 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
SMPD1P17405 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 FAM21FP-201ENST00000426241 1131 ntBASIC17.65■□□□□ 0.42
SMPD1P17405 AC016694.1-201ENST00000434179 700 ntBASIC17.65■□□□□ 0.42
SMPD1P17405 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMPD1P17405 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.65■□□□□ 0.42
SMPD1P17405 AC026410.3-201ENST00000514280 936 ntBASIC17.65■□□□□ 0.42
SMPD1P17405 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.65■□□□□ 0.42
SMPD1P17405 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.65■□□□□ 0.42
SMPD1P17405 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 AL606495.2-201ENST00000605867 535 ntBASIC17.65■□□□□ 0.42
SMPD1P17405 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.65■□□□□ 0.42
SMPD1P17405 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.65■□□□□ 0.42
SMPD1P17405 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms