Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
COL11A1P12107 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
COL11A1P12107 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.88■□□□□ 0.45
COL11A1P12107 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.88■□□□□ 0.45
COL11A1P12107 RN7SL219P-201ENST00000582872 296 ntBASIC17.88■□□□□ 0.45
COL11A1P12107 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.88■□□□□ 0.45
COL11A1P12107 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 GPR182-203ENST00000622922 591 ntBASIC17.88■□□□□ 0.45
COL11A1P12107 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.88■□□□□ 0.45
COL11A1P12107 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL11A1P12107 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 AC024909.3-201ENST00000611513 2257 ntBASIC17.88■□□□□ 0.45
COL11A1P12107 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.88■□□□□ 0.45
COL11A1P12107 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.88■□□□□ 0.45
COL11A1P12107 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.88■□□□□ 0.45
COL11A1P12107 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.88■□□□□ 0.45
COL11A1P12107 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.88■□□□□ 0.45
COL11A1P12107 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 AC010328.2-201ENST00000597698 1111 ntBASIC17.88■□□□□ 0.45
COL11A1P12107 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
COL11A1P12107 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
COL11A1P12107 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL11A1P12107 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
COL11A1P12107 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.87■□□□□ 0.45
COL11A1P12107 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.87■□□□□ 0.45
COL11A1P12107 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.87■□□□□ 0.45
COL11A1P12107 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL11A1P12107 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 AC092933.1-201ENST00000393644 945 ntBASIC17.87■□□□□ 0.45
COL11A1P12107 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.87■□□□□ 0.45
COL11A1P12107 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.87■□□□□ 0.45
COL11A1P12107 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.87■□□□□ 0.45
COL11A1P12107 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
COL11A1P12107 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.87■□□□□ 0.45
COL11A1P12107 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.87■□□□□ 0.45
COL11A1P12107 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.87■□□□□ 0.45
COL11A1P12107 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL11A1P12107 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.87■□□□□ 0.45
COL11A1P12107 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL11A1P12107 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
COL11A1P12107 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 RPL13AP20-201ENST00000459725 609 ntBASIC17.86■□□□□ 0.45
COL11A1P12107 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.86■□□□□ 0.45
COL11A1P12107 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.86■□□□□ 0.45
COL11A1P12107 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.86■□□□□ 0.45
COL11A1P12107 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.86■□□□□ 0.45
COL11A1P12107 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL11A1P12107 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms