Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 KRT18P32-201ENST00000424695 1287 ntBASIC16.17■□□□□ 0.18
THRAP10827 FAM8A3P-201ENST00000427218 844 ntBASIC16.17■□□□□ 0.18
THRAP10827 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.17■□□□□ 0.18
THRAP10827 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.17■□□□□ 0.18
THRAP10827 AC069335.1-201ENST00000489972 472 ntBASIC16.17■□□□□ 0.18
THRAP10827 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.17■□□□□ 0.18
THRAP10827 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.17■□□□□ 0.18
THRAP10827 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.17■□□□□ 0.18
THRAP10827 SPCS2P1-201ENST00000561636 679 ntBASIC16.17■□□□□ 0.18
THRAP10827 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.17■□□□□ 0.18
THRAP10827 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.17■□□□□ 0.18
THRAP10827 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.17■□□□□ 0.18
THRAP10827 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.17■□□□□ 0.18
THRAP10827 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
THRAP10827 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.17■□□□□ 0.18
THRAP10827 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.17■□□□□ 0.18
THRAP10827 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.17■□□□□ 0.18
THRAP10827 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
THRAP10827 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THRAP10827 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.16■□□□□ 0.18
THRAP10827 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
THRAP10827 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
THRAP10827 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 SLC22A20-204ENST00000530038 1673 ntBASIC16.16■□□□□ 0.18
THRAP10827 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.16■□□□□ 0.18
THRAP10827 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.16■□□□□ 0.18
THRAP10827 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 SPCS2P4-201ENST00000436160 681 ntBASIC16.16■□□□□ 0.18
THRAP10827 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
THRAP10827 AC092364.2-202ENST00000597012 1073 ntBASIC16.16■□□□□ 0.18
THRAP10827 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
THRAP10827 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
THRAP10827 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
THRAP10827 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.16■□□□□ 0.18
THRAP10827 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.16■□□□□ 0.18
THRAP10827 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THRAP10827 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.16■□□□□ 0.18
THRAP10827 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.16■□□□□ 0.18
THRAP10827 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
THRAP10827 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.15■□□□□ 0.18
THRAP10827 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.15■□□□□ 0.18
THRAP10827 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.15■□□□□ 0.18
THRAP10827 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.15■□□□□ 0.18
THRAP10827 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
THRAP10827 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 RNU1-129P-201ENST00000384064 167 ntBASIC16.15■□□□□ 0.18
THRAP10827 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.15■□□□□ 0.18
THRAP10827 AC092474.2-201ENST00000424288 719 ntBASIC16.15■□□□□ 0.18
THRAP10827 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.15■□□□□ 0.18
THRAP10827 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 AC067863.1-201ENST00000494933 530 ntBASIC16.15■□□□□ 0.18
THRAP10827 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.15■□□□□ 0.18
THRAP10827 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.15■□□□□ 0.18
THRAP10827 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
THRAP10827 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 MIR3909-201ENST00000579518 119 ntBASIC16.15■□□□□ 0.18
THRAP10827 U1.21-201ENST00000580816 167 ntBASIC16.15■□□□□ 0.18
THRAP10827 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
THRAP10827 Z92544.3-201ENST00000624747 417 ntBASIC16.15■□□□□ 0.18
THRAP10827 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms