Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBCP0CG48 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBCP0CG48 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 TMBIM7P-203ENST00000641617 1718 ntBASIC14.12□□□□□ -0.15
UBCP0CG48 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.12□□□□□ -0.15
UBCP0CG48 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.12□□□□□ -0.15
UBCP0CG48 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.12□□□□□ -0.15
UBCP0CG48 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.12□□□□□ -0.15
UBCP0CG48 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 MIR4321-201ENST00000592276 80 ntBASIC14.12□□□□□ -0.15
UBCP0CG48 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 AC010507.1-201ENST00000633895 436 ntBASIC14.12□□□□□ -0.15
UBCP0CG48 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 PPT1-215ENST00000641471 2368 ntBASIC14.12□□□□□ -0.15
UBCP0CG48 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
UBCP0CG48 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.12□□□□□ -0.15
UBCP0CG48 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBCP0CG48 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 AC073439.1-201ENST00000624121 1774 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 AC013268.4-201ENST00000637413 2228 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBCP0CG48 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UBCP0CG48 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 AC004870.1-201ENST00000315132 882 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 AL031284.1-201ENST00000419297 478 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms