Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLTAP09496 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLTAP09496 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLTAP09496 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLTAP09496 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.58■□□□□ 0.4
CLTAP09496 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.58■□□□□ 0.4
CLTAP09496 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CLTAP09496 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.58■□□□□ 0.4
CLTAP09496 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.58■□□□□ 0.4
CLTAP09496 AC093214.1-201ENST00000511688 1107 ntBASIC17.58■□□□□ 0.4
CLTAP09496 RNA5SP421-201ENST00000516864 134 ntBASIC17.58■□□□□ 0.4
CLTAP09496 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.58■□□□□ 0.4
CLTAP09496 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.58■□□□□ 0.4
CLTAP09496 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLTAP09496 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.58■□□□□ 0.4
CLTAP09496 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.58■□□□□ 0.4
CLTAP09496 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.58■□□□□ 0.4
CLTAP09496 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLTAP09496 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLTAP09496 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.58■□□□□ 0.4
CLTAP09496 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.58■□□□□ 0.4
CLTAP09496 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.58■□□□□ 0.4
CLTAP09496 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLTAP09496 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.57■□□□□ 0.4
CLTAP09496 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 AL596087.1-201ENST00000400979 1969 ntBASIC17.57■□□□□ 0.4
CLTAP09496 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.57■□□□□ 0.4
CLTAP09496 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLTAP09496 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 BASP1P1-201ENST00000430708 665 ntBASIC17.57■□□□□ 0.4
CLTAP09496 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.57■□□□□ 0.4
CLTAP09496 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.57■□□□□ 0.4
CLTAP09496 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.57■□□□□ 0.4
CLTAP09496 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.57■□□□□ 0.4
CLTAP09496 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.57■□□□□ 0.4
CLTAP09496 AL079307.3-201ENST00000556114 283 ntBASIC17.57■□□□□ 0.4
CLTAP09496 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.57■□□□□ 0.4
CLTAP09496 AL390754.1-201ENST00000619088 582 ntBASIC17.57■□□□□ 0.4
CLTAP09496 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.57■□□□□ 0.4
CLTAP09496 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLTAP09496 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.57■□□□□ 0.4
CLTAP09496 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.57■□□□□ 0.4
CLTAP09496 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLTAP09496 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLTAP09496 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.57■□□□□ 0.4
CLTAP09496 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 AC241585.1-201ENST00000433527 519 ntBASIC17.56■□□□□ 0.4
CLTAP09496 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.56■□□□□ 0.4
CLTAP09496 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.56■□□□□ 0.4
CLTAP09496 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.56■□□□□ 0.4
CLTAP09496 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.56■□□□□ 0.4
CLTAP09496 AC011467.4-201ENST00000594891 528 ntBASIC17.56■□□□□ 0.4
CLTAP09496 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms