Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.62■□□□□ 0.25
CD48P09326 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.62■□□□□ 0.25
CD48P09326 ALG1L8P-201ENST00000533887 760 ntBASIC16.62■□□□□ 0.25
CD48P09326 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.62■□□□□ 0.25
CD48P09326 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.62■□□□□ 0.25
CD48P09326 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CD48P09326 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 AC126177.1-201ENST00000547829 2218 ntBASIC16.61■□□□□ 0.25
CD48P09326 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 SSR4P1-203ENST00000599569 2260 ntBASIC16.61■□□□□ 0.25
CD48P09326 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.61■□□□□ 0.25
CD48P09326 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CD48P09326 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.61■□□□□ 0.25
CD48P09326 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 BANF1P1-201ENST00000553684 263 ntBASIC16.61■□□□□ 0.25
CD48P09326 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.61■□□□□ 0.25
CD48P09326 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 AC055717.3-201ENST00000622967 595 ntBASIC16.61■□□□□ 0.25
CD48P09326 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
CD48P09326 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CD48P09326 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD48P09326 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.61■□□□□ 0.25
CD48P09326 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CD48P09326 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CD48P09326 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CD48P09326 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 AC104640.1-201ENST00000562617 2109 ntBASIC16.6■□□□□ 0.25
CD48P09326 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CD48P09326 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.6■□□□□ 0.25
CD48P09326 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.6■□□□□ 0.25
CD48P09326 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 AC004987.2-201ENST00000395959 1148 ntBASIC16.6■□□□□ 0.25
CD48P09326 AC211486.1-202ENST00000416371 468 ntBASIC16.6■□□□□ 0.25
CD48P09326 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.6■□□□□ 0.25
CD48P09326 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.6■□□□□ 0.25
CD48P09326 AC211476.1-201ENST00000503899 468 ntBASIC16.6■□□□□ 0.25
CD48P09326 AP000344.2-201ENST00000512987 629 ntBASIC16.6■□□□□ 0.25
CD48P09326 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.6■□□□□ 0.25
CD48P09326 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.6■□□□□ 0.25
CD48P09326 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
CD48P09326 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.6■□□□□ 0.25
CD48P09326 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.6■□□□□ 0.25
CD48P09326 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.6■□□□□ 0.25
CD48P09326 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms