Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AC064862.7-201ENST00000604520 867 ntBASIC17.25■□□□□ 0.35
TUBB4AP04350 AC114341.1-201ENST00000618070 349 ntBASIC17.25■□□□□ 0.35
TUBB4AP04350 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TUBB4AP04350 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB4AP04350 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBB4AP04350 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB4AP04350 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB4AP04350 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TUBB4AP04350 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TUBB4AP04350 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB4AP04350 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TUBB4AP04350 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB4AP04350 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TUBB4AP04350 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB4AP04350 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TUBB4AP04350 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBB4AP04350 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB4AP04350 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBB4AP04350 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TUBB4AP04350 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB4AP04350 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBB4AP04350 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB4AP04350 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB4AP04350 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 Z69720.1-201ENST00000601483 472 ntBASIC17.24■□□□□ 0.35
TUBB4AP04350 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBB4AP04350 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBB4AP04350 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB4AP04350 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBB4AP04350 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TUBB4AP04350 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB4AP04350 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB4AP04350 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB4AP04350 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TUBB4AP04350 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBB4AP04350 AC129492.6-201ENST00000611383 1305 ntBASIC17.23■□□□□ 0.35
TUBB4AP04350 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TUBB4AP04350 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TUBB4AP04350 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.23■□□□□ 0.35
TUBB4AP04350 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TUBB4AP04350 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBB4AP04350 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TUBB4AP04350 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TUBB4AP04350 AL645939.2-201ENST00000427340 991 ntBASIC17.23■□□□□ 0.35
TUBB4AP04350 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 SLC25A6P2-201ENST00000497974 877 ntBASIC17.23■□□□□ 0.35
TUBB4AP04350 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 AC096582.2-201ENST00000510860 516 ntBASIC17.23■□□□□ 0.35
TUBB4AP04350 AC107918.2-201ENST00000530817 355 ntBASIC17.23■□□□□ 0.35
TUBB4AP04350 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBB4AP04350 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TUBB4AP04350 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB4AP04350 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms