Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.53□□□□□ -0.24
CD74P04233 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.53□□□□□ -0.24
CD74P04233 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD74P04233 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.53□□□□□ -0.24
CD74P04233 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
CD74P04233 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CD74P04233 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD74P04233 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD74P04233 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CD74P04233 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
CD74P04233 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD74P04233 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD74P04233 AC126755.1-201ENST00000525846 6405 ntBASIC13.52□□□□□ -0.24
CD74P04233 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD74P04233 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CD74P04233 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CD74P04233 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.52□□□□□ -0.24
CD74P04233 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.52□□□□□ -0.24
CD74P04233 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD74P04233 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD74P04233 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CD74P04233 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD74P04233 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CD74P04233 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CD74P04233 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.52□□□□□ -0.25
CD74P04233 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.52□□□□□ -0.25
CD74P04233 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.52□□□□□ -0.25
CD74P04233 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CD74P04233 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.52□□□□□ -0.25
CD74P04233 FAM86EP-206ENST00000510506 987 ntBASIC13.52□□□□□ -0.25
CD74P04233 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.52□□□□□ -0.25
CD74P04233 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.52□□□□□ -0.25
CD74P04233 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.52□□□□□ -0.25
CD74P04233 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.52□□□□□ -0.25
CD74P04233 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.52□□□□□ -0.25
CD74P04233 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.52□□□□□ -0.25
CD74P04233 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.52□□□□□ -0.25
CD74P04233 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.52□□□□□ -0.25
CD74P04233 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CD74P04233 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.52□□□□□ -0.25
CD74P04233 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.52□□□□□ -0.25
CD74P04233 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.52□□□□□ -0.25
CD74P04233 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.52□□□□□ -0.25
CD74P04233 AJ011931.1-201ENST00000618749 2492 ntBASIC13.52□□□□□ -0.25
CD74P04233 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.52□□□□□ -0.25
CD74P04233 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.52□□□□□ -0.25
CD74P04233 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD74P04233 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CD74P04233 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CD74P04233 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD74P04233 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.51□□□□□ -0.25
CD74P04233 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD74P04233 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CD74P04233 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CD74P04233 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.51□□□□□ -0.25
CD74P04233 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.51□□□□□ -0.25
CD74P04233 AP002469.2-201ENST00000531724 424 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms