Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.43■□□□□ 0.22
MT-ND3P03897 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MT-ND3P03897 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND3P03897 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MT-ND3P03897 AC005829.1-201ENST00000570002 483 ntBASIC16.43■□□□□ 0.22
MT-ND3P03897 AC004790.2-201ENST00000623588 572 ntBASIC16.43■□□□□ 0.22
MT-ND3P03897 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND3P03897 AC092919.2-201ENST00000623631 1645 ntBASIC16.43■□□□□ 0.22
MT-ND3P03897 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND3P03897 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND3P03897 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND3P03897 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MT-ND3P03897 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-ND3P03897 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
MT-ND3P03897 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
MT-ND3P03897 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
MT-ND3P03897 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
MT-ND3P03897 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-ND3P03897 HCG4B-203ENST00000450128 991 ntBASIC16.42■□□□□ 0.22
MT-ND3P03897 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.42■□□□□ 0.22
MT-ND3P03897 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
MT-ND3P03897 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-ND3P03897 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-ND3P03897 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-ND3P03897 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 SSR4P1-203ENST00000599569 2260 ntBASIC16.42■□□□□ 0.22
MT-ND3P03897 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-ND3P03897 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MT-ND3P03897 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-ND3P03897 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-ND3P03897 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-ND3P03897 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.41■□□□□ 0.22
MT-ND3P03897 RPS8P6-201ENST00000426177 609 ntBASIC16.41■□□□□ 0.22
MT-ND3P03897 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 KRT18P2-201ENST00000447938 1258 ntBASIC16.41■□□□□ 0.22
MT-ND3P03897 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
MT-ND3P03897 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-ND3P03897 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-ND3P03897 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.41■□□□□ 0.22
MT-ND3P03897 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 AC134684.3-201ENST00000641758 218 ntBASIC16.41■□□□□ 0.22
MT-ND3P03897 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 TNRC18P2-201ENST00000417666 2714 ntBASIC16.41■□□□□ 0.22
MT-ND3P03897 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 U82695.1-201ENST00000635752 1889 ntBASIC16.41■□□□□ 0.22
MT-ND3P03897 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms