Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 AC005229.1-201ENST00000392885 409 ntBASIC17.3■□□□□ 0.36
CHRNA1P02708 C1QBPP1-201ENST00000400117 770 ntBASIC17.3■□□□□ 0.36
CHRNA1P02708 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA1P02708 RPL13AP25-201ENST00000484130 612 ntBASIC17.3■□□□□ 0.36
CHRNA1P02708 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA1P02708 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA1P02708 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.3■□□□□ 0.36
CHRNA1P02708 AC068587.3-201ENST00000526613 355 ntBASIC17.3■□□□□ 0.36
CHRNA1P02708 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA1P02708 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.3■□□□□ 0.36
CHRNA1P02708 PTP4A1P2-201ENST00000546033 454 ntBASIC17.3■□□□□ 0.36
CHRNA1P02708 AL583810.1-201ENST00000553344 1045 ntBASIC17.3■□□□□ 0.36
CHRNA1P02708 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA1P02708 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA1P02708 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHRNA1P02708 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA1P02708 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA1P02708 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA1P02708 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA1P02708 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHRNA1P02708 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA1P02708 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 AC099336.1-201ENST00000417053 1171 ntBASIC17.29■□□□□ 0.36
CHRNA1P02708 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA1P02708 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA1P02708 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA1P02708 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.29■□□□□ 0.36
CHRNA1P02708 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA1P02708 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA1P02708 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.29■□□□□ 0.36
CHRNA1P02708 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRNA1P02708 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA1P02708 AC006449.6-201ENST00000612330 2296 ntBASIC17.29■□□□□ 0.36
CHRNA1P02708 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CHRNA1P02708 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA1P02708 MSTO2P-201ENST00000314835 1709 ntBASIC17.29■□□□□ 0.36
CHRNA1P02708 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHRNA1P02708 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA1P02708 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CHRNA1P02708 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA1P02708 AC092933.1-201ENST00000393644 945 ntBASIC17.28■□□□□ 0.36
CHRNA1P02708 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA1P02708 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.28■□□□□ 0.36
CHRNA1P02708 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA1P02708 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.28■□□□□ 0.36
CHRNA1P02708 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.28■□□□□ 0.36
CHRNA1P02708 MIR4538-201ENST00000581377 78 ntBASIC17.28■□□□□ 0.36
CHRNA1P02708 AC000095.1-201ENST00000603208 874 ntBASIC17.28■□□□□ 0.36
CHRNA1P02708 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA1P02708 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNA1P02708 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNA1P02708 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA1P02708 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms