Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 TREML5P-201ENST00000421694 576 ntBASIC12.41□□□□□ -0.42
TRBV12-3P01733 AC107890.1-201ENST00000422478 521 ntBASIC12.41□□□□□ -0.42
TRBV12-3P01733 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 AC243562.2-201ENST00000561247 970 ntBASIC12.41□□□□□ -0.42
TRBV12-3P01733 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 AC015911.4-201ENST00000588022 1070 ntBASIC12.41□□□□□ -0.42
TRBV12-3P01733 AC026979.3-201ENST00000607315 403 ntBASIC12.41□□□□□ -0.42
TRBV12-3P01733 SPDYE12P-201ENST00000618416 771 ntBASIC12.41□□□□□ -0.42
TRBV12-3P01733 AC018892.3-201ENST00000623986 2499 ntBASIC12.41□□□□□ -0.42
TRBV12-3P01733 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.41□□□□□ -0.42
TRBV12-3P01733 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV12-3P01733 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 RFPL4AP1-201ENST00000530883 850 ntBASIC12.4□□□□□ -0.42
TRBV12-3P01733 AC027796.2-201ENST00000575326 344 ntBASIC12.4□□□□□ -0.42
TRBV12-3P01733 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 AL589739.1-201ENST00000607720 493 ntBASIC12.4□□□□□ -0.42
TRBV12-3P01733 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 AL035456.1-201ENST00000456064 1369 ntBASIC12.4□□□□□ -0.42
TRBV12-3P01733 FO538757.1-201ENST00000623083 1397 ntBASIC12.4□□□□□ -0.42
TRBV12-3P01733 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV12-3P01733 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV12-3P01733 AP001282.1-201ENST00000531301 1499 ntBASIC12.4□□□□□ -0.43
TRBV12-3P01733 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.4□□□□□ -0.43
TRBV12-3P01733 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRBV12-3P01733 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.4□□□□□ -0.43
TRBV12-3P01733 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRBV12-3P01733 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 AL365203.3-201ENST00000609742 2057 ntBASIC12.39□□□□□ -0.43
TRBV12-3P01733 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.39□□□□□ -0.43
TRBV12-3P01733 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV12-3P01733 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV12-3P01733 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms